Circrna id in arraystar database
WebIn this study, we used the Arraystar Human circRNA Array to construct a genome-wide circRNA profile of esophageal squamous cell cancer (ESCC) and breast cancer (BC). ... details and specific drugs of interest and we will match the information you provide to articles from our extensive database and email PDF copies to you promptly. Learn more ... WebstarBase is designed for decoding the Interaction Networks of lncRNAs, miRNAs, competing endogenous RNAs (ceRNAs), RNA-binding proteins (RBPs) and mRNAs from …
Circrna id in arraystar database
Did you know?
WebFor annotating circRNAs, circBase ID (e.g. hsa_circ_0000002) and genomic location (e.g. chr1:1158623-1159348) are accepted data, and you can check “Single circRNA” or “Multiple circRNAs” to input one or more circRNAs. For searching circRNA in circBase, circBase ID, genomic location and gene symbol (e.g. SDF4) are accepted data. http://circbase.org/
http://circatlas.biols.ac.cn/ WebApr 12, 2024 · Construction of a circRNA-Related ceRNA Prognostic Regulatory Network in Breast Cancer. April 12, 2024. Introduction. Breast cancer is the second most common cancer and is the leading cause of cancer-related death among females worldwide with over 2 million newly diagnosed cases and more than 60 thousand deaths every year.
WebJul 12, 2024 · The datasets originated from the same platform: Agilent-069978 Arraystar Human CircRNA microarray V1. We analyzed differentially expressed circRNAs using the GEO2R tool and identified 449 upregulated and 604 downregulated circRNAs in the GSE94508 dataset, and 1205 upregulated and 1052 downregulated circRNAs in the … WebThe aim of this study was to identify circRNAs involved in lung adenocarcinoma (LUAD) using bioinformatics analysis. Methods: CircRNA (GSE101684, GSE101586), miRNA (GSE135918), and mRNA (GSE130779) microarray datasets were downloaded from the Gene Expression Omnibus (GEO) database to identify differentially expressed circRNAs …
WebWe used circBase as a reference database to annotate circRNAs consistently and then unified all probes from the Arraystar Human CircRNA microarray versions 1 and 2 into circBase IDs. An additional 14 datasets …
http://www.circbank.cn/ shareforgood.comWebTCGA database were downloaded to validate the expres- sion levels of selected DEmRNAs and DEmiRNAs. ... Table 1 List of mRNA/miRNA/circRNA Study Samples from GEO GEO ID Author Platform Samples (N: CSCC) Year ... GSE102686 Jiao J GPL19978 Agilent-069978 Arraystar Human CircRNA microarray V1 5: 5 2024 Label aataset aataset … share for good nwdWebNov 27, 2024 · CircRNAs are covalently closed continuous loop type of single-stranded RNAs in mammalian cells ubiquitously and regulate gene expression 6. Previous studies have shown that circRNAs can regulate... share forecastWebArraystar uses cutting edge science, state of the art technologies, and innovative products to empower biomedical science researchers. We provide comprehensive and systematic … share for freeWebArraystar offers Integrated microRNA Sequencing Service from sequencing library preparation to comprehensive data anlaysis. Our data analysis process generally consists of the following steps, raw data processing, usable reads filtering (including 3' adapter trimming and normalization), and bioinformatics analysis ( fig. 1). poop toys for dogsWebCircRNAs are widely expressed in a tissue and developmental-stage specific pattern and a subset displays conservation across species. In accordance with an important role in the … poop toys 2018WebFeb 4, 2024 · Discussion. As a comprehensive functional circRNA database, CircFunBase is designed to provide a rich data resource for circRNA study. CircFunBase has collected recently discovered functional circRNAs from relevant literature. Currently, more than 7000 functional circRNAs from 15 model species are deposited in CircFunBase. share for good new world